WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11A.4.1 Sequence Name  Y57G11A.4.1
Length (nt)  892   Chromosome Location  IV: 14482476-14486439
Chromosome . Primary Identifier  IV Chromosome Location . Start  14482476
Chromosome Location . End  14486439 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013292 Y57G11A.4 Y57G11A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11A.4 Y57G11A.4 789   IV: 14482482-14482549

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.4.1 14482476 14486439 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon155121   74   IV: 14482476-14482549 Caenorhabditis elegans
Exon155124   130   IV: 14482969-14483098 Caenorhabditis elegans
Exon155128   63   IV: 14483368-14483430 Caenorhabditis elegans
Exon155132   88   IV: 14483578-14483665 Caenorhabditis elegans
Exon155137   204   IV: 14484160-14484363 Caenorhabditis elegans
Exon155140   89   IV: 14484540-14484628 Caenorhabditis elegans
Exon155150   244   IV: 14486196-14486439 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.4.1 14482476 14486439 1

1 Sequence

Length
892

1 Sequence Ontology Term

Identifier Name Description
transcript