WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11A.1e.1 Sequence Name  Y57G11A.1e.1
Length (nt)  2676   Chromosome Location  IV: 14487220-14505139
Chromosome . Primary Identifier  IV Chromosome Location . Start  14487220
Chromosome Location . End  14505139 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11A.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013289 tag-273 Y57G11A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11A.1e Y57G11A.1e 2676   IV: 14487220-14487388

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.1e.1 14487220 14505139 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon155162   169   IV: 14487220-14487388 Caenorhabditis elegans
Exon155170   134   IV: 14487838-14487971 Caenorhabditis elegans
Exon155187   206   IV: 14489580-14489785 Caenorhabditis elegans
Exon155195   406   IV: 14490301-14490706 Caenorhabditis elegans
Exon155207   401   IV: 14491655-14492055 Caenorhabditis elegans
Exon155214   97   IV: 14492674-14492770 Caenorhabditis elegans
Exon155223   261   IV: 14493330-14493590 Caenorhabditis elegans
Exon155250   113   IV: 14496376-14496488 Caenorhabditis elegans
Exon155278   78   IV: 14500443-14500520 Caenorhabditis elegans
Exon155288   107   IV: 14501232-14501338 Caenorhabditis elegans
Exon155294   228   IV: 14501734-14501961 Caenorhabditis elegans
Exon155304   239   IV: 14502918-14503156 Caenorhabditis elegans
Exon155313   105   IV: 14503620-14503724 Caenorhabditis elegans
Exon155315   24   IV: 14504013-14504036 Caenorhabditis elegans
Exon155326   108   IV: 14505032-14505139 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.1e.1 14487220 14505139 -1

1 Sequence

Length
2676

1 Sequence Ontology Term

Identifier Name Description
transcript