WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11A.1b.1 Sequence Name  Y57G11A.1b.1
Length (nt)  2524   Chromosome Location  IV: 14488145-14505166
Chromosome . Primary Identifier  IV Chromosome Location . Start  14488145
Chromosome Location . End  14505166 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11A.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013289 tag-273 Y57G11A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11A.1b Y57G11A.1b 2358   IV: 14488284-14488292

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.1b.1 14488145 14505166 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon155172   148   IV: 14488145-14488292 Caenorhabditis elegans
Exon155185   206   IV: 14489580-14489785 Caenorhabditis elegans
Exon155193   406   IV: 14490301-14490706 Caenorhabditis elegans
Exon155205   401   IV: 14491655-14492055 Caenorhabditis elegans
Exon155212   97   IV: 14492674-14492770 Caenorhabditis elegans
Exon155221   261   IV: 14493330-14493590 Caenorhabditis elegans
Exon155248   113   IV: 14496376-14496488 Caenorhabditis elegans
Exon155276   78   IV: 14500443-14500520 Caenorhabditis elegans
Exon155286   107   IV: 14501232-14501338 Caenorhabditis elegans
Exon155292   228   IV: 14501734-14501961 Caenorhabditis elegans
Exon155302   239   IV: 14502918-14503156 Caenorhabditis elegans
Exon155311   105   IV: 14503620-14503724 Caenorhabditis elegans
Exon155328   135   IV: 14505032-14505166 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.1b.1 14488145 14505166 -1

1 Sequence

Length
2524

1 Sequence Ontology Term

Identifier Name Description
transcript