WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11A.1d.1 Sequence Name  Y57G11A.1d.1
Length (nt)  2457   Chromosome Location  IV: 14488284-14505139
Chromosome . Primary Identifier  IV Chromosome Location . Start  14488284
Chromosome Location . End  14505139 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11A.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013289 tag-273 Y57G11A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11A.1d Y57G11A.1d 2457   IV: 14488284-14488292

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.1d.1 14488284 14505139 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon155173   9   IV: 14488284-14488292 Caenorhabditis elegans
Exon155186   206   IV: 14489580-14489785 Caenorhabditis elegans
Exon155194   406   IV: 14490301-14490706 Caenorhabditis elegans
Exon155206   401   IV: 14491655-14492055 Caenorhabditis elegans
Exon155210   99   IV: 14492283-14492381 Caenorhabditis elegans
Exon155213   97   IV: 14492674-14492770 Caenorhabditis elegans
Exon155222   261   IV: 14493330-14493590 Caenorhabditis elegans
Exon155249   113   IV: 14496376-14496488 Caenorhabditis elegans
Exon155277   78   IV: 14500443-14500520 Caenorhabditis elegans
Exon155287   107   IV: 14501232-14501338 Caenorhabditis elegans
Exon155293   228   IV: 14501734-14501961 Caenorhabditis elegans
Exon155303   239   IV: 14502918-14503156 Caenorhabditis elegans
Exon155312   105   IV: 14503620-14503724 Caenorhabditis elegans
Exon155325   108   IV: 14505032-14505139 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.1d.1 14488284 14505139 -1

1 Sequence

Length
2457

1 Sequence Ontology Term

Identifier Name Description
transcript