WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11A.1e.1 Sequence Name  Y57G11A.1e.1
Length (nt)  2676   Chromosome Location  IV: 14487220-14505139
Chromosome . Primary Identifier  IV Chromosome Location . Start  14487220
Chromosome Location . End  14505139 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11A.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013289 tag-273 Y57G11A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11A.1e Y57G11A.1e 2676   IV: 14487220-14487388

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.1e.1 14487220 14505139 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon155217   169   IV: 14487220-14487388 Caenorhabditis elegans
Exon155225   134   IV: 14487838-14487971 Caenorhabditis elegans
Exon155242   206   IV: 14489580-14489785 Caenorhabditis elegans
Exon155250   406   IV: 14490301-14490706 Caenorhabditis elegans
Exon155262   401   IV: 14491655-14492055 Caenorhabditis elegans
Exon155269   97   IV: 14492674-14492770 Caenorhabditis elegans
Exon155278   261   IV: 14493330-14493590 Caenorhabditis elegans
Exon155305   113   IV: 14496376-14496488 Caenorhabditis elegans
Exon155333   78   IV: 14500443-14500520 Caenorhabditis elegans
Exon155343   107   IV: 14501232-14501338 Caenorhabditis elegans
Exon155349   228   IV: 14501734-14501961 Caenorhabditis elegans
Exon155359   239   IV: 14502918-14503156 Caenorhabditis elegans
Exon155368   105   IV: 14503620-14503724 Caenorhabditis elegans
Exon155370   24   IV: 14504013-14504036 Caenorhabditis elegans
Exon155381   108   IV: 14505032-14505139 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.1e.1 14487220 14505139 -1

1 Sequence

Length
2676

1 Sequence Ontology Term

Identifier Name Description
transcript