WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11A.2.1 Sequence Name  Y57G11A.2.1
Length (nt)  2057   Chromosome Location  IV: 14517022-14519523
Chromosome . Primary Identifier  IV Chromosome Location . Start  14517022
Chromosome Location . End  14519523 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013290 Y57G11A.2 Y57G11A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11A.2 Y57G11A.2 1923   IV: 14517091-14517204

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.2.1 14517022 14519523 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon155399   183   IV: 14517022-14517204 Caenorhabditis elegans
Exon155401   1055   IV: 14517255-14518309 Caenorhabditis elegans
Exon155404   90   IV: 14518360-14518449 Caenorhabditis elegans
Exon155405   222   IV: 14518498-14518719 Caenorhabditis elegans
Exon155406   213   IV: 14518792-14519004 Caenorhabditis elegans
Exon155407   294   IV: 14519230-14519523 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11A.2.1 14517022 14519523 -1

1 Sequence

Length
2057

1 Sequence Ontology Term

Identifier Name Description
transcript