WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.39.1 Sequence Name  Y57G11C.39.1
Length (nt)  824   Chromosome Location  IV: 14637713-14641370
Chromosome . Primary Identifier  IV Chromosome Location . Start  14637713
Chromosome Location . End  14641370 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.39.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013328 srlf-27 Y57G11C.39 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.39 Y57G11C.39 645   IV: 14637751-14637943

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.39.1 14637713 14641370 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon155920   231   IV: 14637713-14637943 Caenorhabditis elegans
Exon155926   119   IV: 14639884-14640002 Caenorhabditis elegans
Exon155931   144   IV: 14640312-14640455 Caenorhabditis elegans
Exon155935   330   IV: 14641041-14641370 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.39.1 14637713 14641370 1

1 Sequence

Length
824

1 Sequence Ontology Term

Identifier Name Description
transcript