WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.37a.1 Sequence Name  Y57G11C.37a.1
Length (nt)  2859   Chromosome Location  IV: 14658308-14675155
Chromosome . Primary Identifier  IV Chromosome Location . Start  14658308
Chromosome Location . End  14675155 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.37a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013326 anoh-2 Y57G11C.37 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.37a Y57G11C.37a 2514   IV: 14663674-14663762

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.37a.1 14658308 14675155 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156036   174   IV: 14658308-14658481 Caenorhabditis elegans
Exon156057   94   IV: 14663669-14663762 Caenorhabditis elegans
Exon156061   192   IV: 14664209-14664400 Caenorhabditis elegans
Exon156073   370   IV: 14665939-14666308 Caenorhabditis elegans
Exon156083   159   IV: 14667146-14667304 Caenorhabditis elegans
Exon156098   247   IV: 14668619-14668865 Caenorhabditis elegans
Exon156105   88   IV: 14669726-14669813 Caenorhabditis elegans
Exon156108   122   IV: 14669861-14669982 Caenorhabditis elegans
Exon156111   131   IV: 14670029-14670159 Caenorhabditis elegans
Exon156116   666   IV: 14671196-14671861 Caenorhabditis elegans
Exon156133   231   IV: 14673829-14674059 Caenorhabditis elegans
Exon156141   385   IV: 14674771-14675155 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.37a.1 14658308 14675155 1

1 Sequence

Length
2859

1 Sequence Ontology Term

Identifier Name Description
transcript