WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.37a.2 Sequence Name  Y57G11C.37a.2
Length (nt)  2687   Chromosome Location  IV: 14663667-14675155
Chromosome . Primary Identifier  IV Chromosome Location . Start  14663667
Chromosome Location . End  14675155 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.37a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013326 anoh-2 Y57G11C.37 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.37a Y57G11C.37a 2514   IV: 14663674-14663762

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.37a.2 14663667 14675155 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156056   96   IV: 14663667-14663762 Caenorhabditis elegans
Exon156062   192   IV: 14664209-14664400 Caenorhabditis elegans
Exon156074   370   IV: 14665939-14666308 Caenorhabditis elegans
Exon156084   159   IV: 14667146-14667304 Caenorhabditis elegans
Exon156099   247   IV: 14668619-14668865 Caenorhabditis elegans
Exon156106   88   IV: 14669726-14669813 Caenorhabditis elegans
Exon156109   122   IV: 14669861-14669982 Caenorhabditis elegans
Exon156112   131   IV: 14670029-14670159 Caenorhabditis elegans
Exon156117   666   IV: 14671196-14671861 Caenorhabditis elegans
Exon156134   231   IV: 14673829-14674059 Caenorhabditis elegans
Exon156142   385   IV: 14674771-14675155 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.37a.2 14663667 14675155 1

1 Sequence

Length
2687

1 Sequence Ontology Term

Identifier Name Description
transcript