WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.31.2 Sequence Name  Y57G11C.31.2
Length (nt)  1460   Chromosome Location  IV: 14677370-14687406
Chromosome . Primary Identifier  IV Chromosome Location . Start  14677370
Chromosome Location . End  14687406 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.31.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013321 Y57G11C.31 Y57G11C.31 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.31 Y57G11C.31 1215   IV: 14683045-14683524

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.31.2 14677370 14687406 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156153   100   IV: 14677370-14677469 Caenorhabditis elegans
Exon156183   482   IV: 14683043-14683524 Caenorhabditis elegans
Exon156190   80   IV: 14684319-14684398 Caenorhabditis elegans
Exon156201   303   IV: 14685804-14686106 Caenorhabditis elegans
Exon156210   157   IV: 14686767-14686923 Caenorhabditis elegans
Exon156213   338   IV: 14687069-14687406 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.31.2 14677370 14687406 1

1 Sequence

Length
1460

1 Sequence Ontology Term

Identifier Name Description
transcript