WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.42b.2 Sequence Name  Y57G11C.42b.2
Length (nt)  1972   Chromosome Location  IV: 14728525-14745672
Chromosome . Primary Identifier  IV Chromosome Location . Start  14728525
Chromosome Location . End  14745672 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.42b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013331 Y57G11C.42 Y57G11C.42 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.42b Y57G11C.42b 1695   IV: 14734350-14734527

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.42b.2 14728525 14745672 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156453   62   IV: 14728525-14728586 Caenorhabditis elegans
Exon156493   180   IV: 14734348-14734527 Caenorhabditis elegans
Exon156503   117   IV: 14734926-14735042 Caenorhabditis elegans
Exon156516   314   IV: 14735511-14735824 Caenorhabditis elegans
Exon156522   121   IV: 14735875-14735995 Caenorhabditis elegans
Exon156532   172   IV: 14736752-14736923 Caenorhabditis elegans
Exon156564   131   IV: 14741631-14741761 Caenorhabditis elegans
Exon156575   86   IV: 14741907-14741992 Caenorhabditis elegans
Exon156586   327   IV: 14742527-14742853 Caenorhabditis elegans
Exon156603   122   IV: 14744047-14744168 Caenorhabditis elegans
Exon156627   340   IV: 14745333-14745672 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.42b.2 14728525 14745672 1

1 Sequence

Length
1972

1 Sequence Ontology Term

Identifier Name Description
transcript