WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.42b.1 Sequence Name  Y57G11C.42b.1
Length (nt)  1918   Chromosome Location  IV: 14734344-14745676
Chromosome . Primary Identifier  IV Chromosome Location . Start  14734344
Chromosome Location . End  14745676 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.42b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013331 Y57G11C.42 Y57G11C.42 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.42b Y57G11C.42b 1695   IV: 14734350-14734527

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.42b.1 14734344 14745676 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156490   184   IV: 14734344-14734527 Caenorhabditis elegans
Exon156502   117   IV: 14734926-14735042 Caenorhabditis elegans
Exon156515   314   IV: 14735511-14735824 Caenorhabditis elegans
Exon156521   121   IV: 14735875-14735995 Caenorhabditis elegans
Exon156531   172   IV: 14736752-14736923 Caenorhabditis elegans
Exon156563   131   IV: 14741631-14741761 Caenorhabditis elegans
Exon156574   86   IV: 14741907-14741992 Caenorhabditis elegans
Exon156585   327   IV: 14742527-14742853 Caenorhabditis elegans
Exon156602   122   IV: 14744047-14744168 Caenorhabditis elegans
Exon156628   344   IV: 14745333-14745676 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.42b.1 14734344 14745676 1

1 Sequence

Length
1918

1 Sequence Ontology Term

Identifier Name Description
transcript