WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.42d.1 Sequence Name  Y57G11C.42d.1
Length (nt)  1797   Chromosome Location  IV: 14734350-14745669
Chromosome . Primary Identifier  IV Chromosome Location . Start  14734350
Chromosome Location . End  14745669 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.42d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013331 Y57G11C.42 Y57G11C.42 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.42d Y57G11C.42d 1587   IV: 14734350-14734527

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.42d.1 14734350 14745669 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156498   178   IV: 14734350-14734527 Caenorhabditis elegans
Exon156505   117   IV: 14734926-14735042 Caenorhabditis elegans
Exon156534   172   IV: 14736752-14736923 Caenorhabditis elegans
Exon156549   327   IV: 14738282-14738608 Caenorhabditis elegans
Exon156566   131   IV: 14741631-14741761 Caenorhabditis elegans
Exon156577   86   IV: 14741907-14741992 Caenorhabditis elegans
Exon156588   327   IV: 14742527-14742853 Caenorhabditis elegans
Exon156605   122   IV: 14744047-14744168 Caenorhabditis elegans
Exon156624   337   IV: 14745333-14745669 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.42d.1 14734350 14745669 1

1 Sequence

Length
1797

1 Sequence Ontology Term

Identifier Name Description
transcript