WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y57G11C.6 Sequence Name  Y57G11C.6
Length (nt)  1449   Chromosome Location  IV: 14758419-14758562
Chromosome . Primary Identifier  IV Chromosome Location . Start  14758419
Chromosome Location . End  14758562
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE14936 PTP-5.2 53.1 482 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00057707
WBRNAi00057708
WBRNAi00037610

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y57G11C.6 14758419 14758562 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013304 ptp-5.2 Y57G11C.6 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y57G11C.6 14758419 14758562 -1
CDS:Y57G11C.6 14758616 14759379 -1
CDS:Y57G11C.6 14760220 14760526 -1
CDS:Y57G11C.6 14760573 14760792 -1
CDS:Y57G11C.6 14760883 14760896 -1

1 Sequence

Length
1449

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y57G11C.6.1 Y57G11C.6.1 1562   IV: 14758355-14760945