WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.5b.1 Sequence Name  Y57G11C.5b.1
Length (nt)  1539   Chromosome Location  IV: 14761875-14765271
Chromosome . Primary Identifier  IV Chromosome Location . Start  14761875
Chromosome Location . End  14765271 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013303 Y57G11C.5 Y57G11C.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.5b Y57G11C.5b 1539   IV: 14761875-14762184

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.5b.1 14761875 14765271 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156649   310   IV: 14761875-14762184 Caenorhabditis elegans
Exon156654   191   IV: 14762305-14762495 Caenorhabditis elegans
Exon156659   384   IV: 14762665-14763048 Caenorhabditis elegans
Exon156664   111   IV: 14763918-14764028 Caenorhabditis elegans
Exon156667   287   IV: 14764072-14764358 Caenorhabditis elegans
Exon156671   115   IV: 14764522-14764636 Caenorhabditis elegans
Exon156673   64   IV: 14764681-14764744 Caenorhabditis elegans
Exon156676   77   IV: 14765195-14765271 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.5b.1 14761875 14765271 -1

1 Sequence

Length
1539

1 Sequence Ontology Term

Identifier Name Description
transcript