WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.4.1 Sequence Name  Y57G11C.4.1
Length (nt)  880   Chromosome Location  IV: 14765632-14766665
Chromosome . Primary Identifier  IV Chromosome Location . Start  14765632
Chromosome Location . End  14766665 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013302 vti-1 Y57G11C.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.4 Y57G11C.4 675   IV: 14765828-14766040

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.4.1 14765632 14766665 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156679   409   IV: 14765632-14766040 Caenorhabditis elegans
Exon156680   247   IV: 14766095-14766341 Caenorhabditis elegans
Exon156681   224   IV: 14766442-14766665 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.4.1 14765632 14766665 -1

1 Sequence

Length
880

1 Sequence Ontology Term

Identifier Name Description
transcript