WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.44a.1 Sequence Name  Y57G11C.44a.1
Length (nt)  553   Chromosome Location  IV: 14770654-14771425
Chromosome . Primary Identifier  IV Chromosome Location . Start  14770654
Chromosome Location . End  14771425 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.44a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013333 degl-1 Y57G11C.44 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.44a Y57G11C.44a 468   IV: 14770700-14770729

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.44a.1 14770654 14771425 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156695   76   IV: 14770654-14770729 Caenorhabditis elegans
Exon156698   99   IV: 14770777-14770875 Caenorhabditis elegans
Exon156700   117   IV: 14770941-14771057 Caenorhabditis elegans
Exon156703   79   IV: 14771110-14771188 Caenorhabditis elegans
Exon156704   182   IV: 14771244-14771425 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.44a.1 14770654 14771425 -1

1 Sequence

Length
553

1 Sequence Ontology Term

Identifier Name Description
transcript