WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.45b.2 Sequence Name  Y57G11C.45b.2
Length (nt)  620   Chromosome Location  IV: 14783339-14784737
Chromosome . Primary Identifier  IV Chromosome Location . Start  14783339
Chromosome Location . End  14784737 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.45b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013334 nlp-56 Y57G11C.45 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.45b Y57G11C.45b 345   IV: 14783496-14783539

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.45b.2 14783339 14784737 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156731   201   IV: 14783339-14783539 Caenorhabditis elegans
Exon156736   91   IV: 14783643-14783733 Caenorhabditis elegans
Exon156739   81   IV: 14783948-14784028 Caenorhabditis elegans
Exon156741   129   IV: 14784091-14784219 Caenorhabditis elegans
Exon156745   118   IV: 14784620-14784737 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.45b.2 14783339 14784737 -1

1 Sequence

Length
620

1 Sequence Ontology Term

Identifier Name Description
transcript