WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.10b.1 Sequence Name  Y57G11C.10b.1
Length (nt)  1380   Chromosome Location  IV: 14791138-14792850
Chromosome . Primary Identifier  IV Chromosome Location . Start  14791138
Chromosome Location . End  14792850 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001558 gdi-1 Y57G11C.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.10b Y57G11C.10b 1380   IV: 14791138-14791224

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.10b.1 14791138 14792850 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156854   87   IV: 14791138-14791224 Caenorhabditis elegans
Exon156857   254   IV: 14791282-14791535 Caenorhabditis elegans
Exon156858   1039   IV: 14791812-14792850 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.10b.1 14791138 14792850 -1

1 Sequence

Length
1380

1 Sequence Ontology Term

Identifier Name Description
transcript