WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.50.1 Sequence Name  Y57G11C.50.1
Length (nt)  972   Chromosome Location  IV: 14807203-14809961
Chromosome . Primary Identifier  IV Chromosome Location . Start  14807203
Chromosome Location . End  14809961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.50.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023520 oig-5 Y57G11C.50 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.50 Y57G11C.50 495   IV: 14807353-14807448

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.50.1 14807203 14809961 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156912   246   IV: 14807203-14807448 Caenorhabditis elegans
Exon156913   103   IV: 14807527-14807629 Caenorhabditis elegans
Exon156915   97   IV: 14808285-14808381 Caenorhabditis elegans
Exon156917   182   IV: 14808675-14808856 Caenorhabditis elegans
Exon156920   344   IV: 14809618-14809961 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.50.1 14807203 14809961 1

1 Sequence

Length
972

1 Sequence Ontology Term

Identifier Name Description
transcript