WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.15a.1 Sequence Name  Y57G11C.15a.1
Length (nt)  2135   Chromosome Location  IV: 14822540-14825264
Chromosome . Primary Identifier  IV Chromosome Location . Start  14822540
Chromosome Location . End  14825264 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.15a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013311 sec-61.A Y57G11C.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.15a Y57G11C.15a 1422   IV: 14822839-14823342

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.15a.1 14822540 14825264 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156924   803   IV: 14822540-14823342 Caenorhabditis elegans
Exon156926   566   IV: 14823457-14824022 Caenorhabditis elegans
Exon156929   345   IV: 14824072-14824416 Caenorhabditis elegans
Exon156930   421   IV: 14824844-14825264 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.15a.1 14822540 14825264 -1

1 Sequence

Length
2135

1 Sequence Ontology Term

Identifier Name Description
transcript