WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.16.1 Sequence Name  Y57G11C.16.1
Length (nt)  598   Chromosome Location  IV: 14825679-14826477
Chromosome . Primary Identifier  IV Chromosome Location . Start  14825679
Chromosome Location . End  14826477 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004487 rps-18 Y57G11C.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.16 Y57G11C.16 465   IV: 14825699-14825800

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.16.1 14825679 14826477 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156931   122   IV: 14825679-14825800 Caenorhabditis elegans
Exon156932   189   IV: 14825847-14826035 Caenorhabditis elegans
Exon156933   287   IV: 14826191-14826477 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.16.1 14825679 14826477 1

1 Sequence

Length
598

1 Sequence Ontology Term

Identifier Name Description
transcript