WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y57G11C.17a Sequence Name  Y57G11C.17a
Length (nt)  1575   Chromosome Location  IV: 14826468-14827159
Chromosome . Primary Identifier  IV Chromosome Location . Start  14826468
Chromosome Location . End  14827159
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.17a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39446 HHAT-2, isoform a 60.4 524 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00057689
WBRNAi00021137
WBRNAi00037596
WBRNAi00023369
WBRNAi00023882
WBRNAi00024169
WBRNAi00024245
WBRNAi00110938

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y57G11C.17a 14826468 14827159 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013312 hhat-2 Y57G11C.17 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y57G11C.17a 14826468 14827159 -1
CDS:Y57G11C.17a 14827209 14827726 -1
CDS:Y57G11C.17a 14827781 14827873 -1
CDS:Y57G11C.17a 14828238 14828339 -1
CDS:Y57G11C.17a 14828915 14829084 -1

1 Sequence

Length
1575

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y57G11C.17a.1 Y57G11C.17a.1 1657   IV: 14826428-14829126