WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:Y57G11C.17b Sequence Name  Y57G11C.17b
Length (nt)  594   Chromosome Location  IV: 14827341-14829084
Chromosome . Primary Identifier  IV Chromosome Location . Start  14827341
Chromosome Location . End  14829084 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.17b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013312 hhat-2 Y57G11C.17 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y57G11C.17b 14827341 14829084 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon156936   49   IV: 14827341-14827389 Caenorhabditis elegans
Exon156937   180   IV: 14827547-14827726 Caenorhabditis elegans
Exon156939   93   IV: 14827781-14827873 Caenorhabditis elegans
Exon156941   102   IV: 14828238-14828339 Caenorhabditis elegans
Exon156943   170   IV: 14828915-14829084 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y57G11C.17b 14827341 14829084 -1

1 Sequence

Length
594

1 Sequence Ontology Term

Identifier Name Description
transcript