WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.23.1 Sequence Name  Y57G11C.23.1
Length (nt)  1688   Chromosome Location  IV: 14855286-14861791
Chromosome . Primary Identifier  IV Chromosome Location . Start  14855286
Chromosome Location . End  14861791 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.23.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013318 Y57G11C.23 Y57G11C.23 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.23 Y57G11C.23 1590   IV: 14855331-14855516

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.23.1 14855286 14861791 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon157055   231   IV: 14855286-14855516 Caenorhabditis elegans
Exon157059   387   IV: 14855905-14856291 Caenorhabditis elegans
Exon157061   115   IV: 14856407-14856521 Caenorhabditis elegans
Exon157064   167   IV: 14857101-14857267 Caenorhabditis elegans
Exon157068   144   IV: 14857990-14858133 Caenorhabditis elegans
Exon157075   283   IV: 14859874-14860156 Caenorhabditis elegans
Exon157076   83   IV: 14860205-14860287 Caenorhabditis elegans
Exon157077   92   IV: 14860335-14860426 Caenorhabditis elegans
Exon157079   117   IV: 14861560-14861676 Caenorhabditis elegans
Exon157080   69   IV: 14861723-14861791 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.23.1 14855286 14861791 -1

1 Sequence

Length
1688

1 Sequence Ontology Term

Identifier Name Description
transcript