WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.24g.1 Sequence Name  Y57G11C.24g.1
Length (nt)  3096   Chromosome Location  IV: 14879484-14900653
Chromosome . Primary Identifier  IV Chromosome Location . Start  14879484
Chromosome Location . End  14900653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.24g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.24g Y57G11C.24g 2754   IV: 14879566-14879615

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24g.1 14879484 14900653 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon157183   132   IV: 14879484-14879615 Caenorhabditis elegans
Exon157224   131   IV: 14885573-14885703 Caenorhabditis elegans
Exon157236   221   IV: 14886614-14886834 Caenorhabditis elegans
Exon157253   228   IV: 14888379-14888606 Caenorhabditis elegans
Exon157265   124   IV: 14889210-14889333 Caenorhabditis elegans
Exon157290   311   IV: 14891464-14891774 Caenorhabditis elegans
Exon157302   233   IV: 14891833-14892065 Caenorhabditis elegans
Exon157318   178   IV: 14893787-14893964 Caenorhabditis elegans
Exon157335   104   IV: 14894341-14894444 Caenorhabditis elegans
Exon157346   316   IV: 14894534-14894849 Caenorhabditis elegans
Exon157358   111   IV: 14894906-14895016 Caenorhabditis elegans
Exon157373   67   IV: 14896060-14896126 Caenorhabditis elegans
Exon157388   185   IV: 14897321-14897505 Caenorhabditis elegans
Exon157400   82   IV: 14897620-14897701 Caenorhabditis elegans
Exon157413   157   IV: 14898130-14898286 Caenorhabditis elegans
Exon157426   136   IV: 14898645-14898780 Caenorhabditis elegans
Exon157458   380   IV: 14900274-14900653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24g.1 14879484 14900653 1

1 Sequence

Length
3096

1 Sequence Ontology Term

Identifier Name Description
transcript