WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.24g.1 Sequence Name  Y57G11C.24g.1
Length (nt)  3096   Chromosome Location  IV: 14879484-14900653
Chromosome . Primary Identifier  IV Chromosome Location . Start  14879484
Chromosome Location . End  14900653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.24g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.24g Y57G11C.24g 2754   IV: 14879566-14879615

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24g.1 14879484 14900653 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon157238   132   IV: 14879484-14879615 Caenorhabditis elegans
Exon157279   131   IV: 14885573-14885703 Caenorhabditis elegans
Exon157291   221   IV: 14886614-14886834 Caenorhabditis elegans
Exon157308   228   IV: 14888379-14888606 Caenorhabditis elegans
Exon157320   124   IV: 14889210-14889333 Caenorhabditis elegans
Exon157345   311   IV: 14891464-14891774 Caenorhabditis elegans
Exon157357   233   IV: 14891833-14892065 Caenorhabditis elegans
Exon157373   178   IV: 14893787-14893964 Caenorhabditis elegans
Exon157390   104   IV: 14894341-14894444 Caenorhabditis elegans
Exon157401   316   IV: 14894534-14894849 Caenorhabditis elegans
Exon157413   111   IV: 14894906-14895016 Caenorhabditis elegans
Exon157428   67   IV: 14896060-14896126 Caenorhabditis elegans
Exon157443   185   IV: 14897321-14897505 Caenorhabditis elegans
Exon157455   82   IV: 14897620-14897701 Caenorhabditis elegans
Exon157468   157   IV: 14898130-14898286 Caenorhabditis elegans
Exon157481   136   IV: 14898645-14898780 Caenorhabditis elegans
Exon157513   380   IV: 14900274-14900653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24g.1 14879484 14900653 1

1 Sequence

Length
3096

1 Sequence Ontology Term

Identifier Name Description
transcript