WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.24d.1 Sequence Name  Y57G11C.24d.1
Length (nt)  2538   Chromosome Location  IV: 14886649-14900393
Chromosome . Primary Identifier  IV Chromosome Location . Start  14886649
Chromosome Location . End  14900393 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.24d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.24d Y57G11C.24d 2538   IV: 14886649-14886834

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24d.1 14886649 14900393 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon157242   186   IV: 14886649-14886834 Caenorhabditis elegans
Exon157252   228   IV: 14888379-14888606 Caenorhabditis elegans
Exon157264   124   IV: 14889210-14889333 Caenorhabditis elegans
Exon157289   311   IV: 14891464-14891774 Caenorhabditis elegans
Exon157300   233   IV: 14891833-14892065 Caenorhabditis elegans
Exon157316   178   IV: 14893787-14893964 Caenorhabditis elegans
Exon157333   104   IV: 14894341-14894444 Caenorhabditis elegans
Exon157344   316   IV: 14894534-14894849 Caenorhabditis elegans
Exon157356   111   IV: 14894906-14895016 Caenorhabditis elegans
Exon157371   67   IV: 14896060-14896126 Caenorhabditis elegans
Exon157386   185   IV: 14897321-14897505 Caenorhabditis elegans
Exon157398   82   IV: 14897620-14897701 Caenorhabditis elegans
Exon157411   157   IV: 14898130-14898286 Caenorhabditis elegans
Exon157424   136   IV: 14898645-14898780 Caenorhabditis elegans
Exon157448   120   IV: 14900274-14900393 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24d.1 14886649 14900393 1

1 Sequence

Length
2538

1 Sequence Ontology Term

Identifier Name Description
transcript