WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.24j.1 Sequence Name  Y57G11C.24j.1
Length (nt)  2664   Chromosome Location  IV: 14885688-14900393
Chromosome . Primary Identifier  IV Chromosome Location . Start  14885688
Chromosome Location . End  14900393 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.24j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.24j Y57G11C.24j 2664   IV: 14885688-14885703

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y57G11C.24j.1 14885688 14900393 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon157284   16   IV: 14885688-14885703 Caenorhabditis elegans
Exon157294   221   IV: 14886614-14886834 Caenorhabditis elegans
Exon157311   228   IV: 14888379-14888606 Caenorhabditis elegans
Exon157323   124   IV: 14889210-14889333 Caenorhabditis elegans
Exon157348   311   IV: 14891464-14891774 Caenorhabditis elegans
Exon157360   233   IV: 14891833-14892065 Caenorhabditis elegans
Exon157376   178   IV: 14893787-14893964 Caenorhabditis elegans
Exon157383   75   IV: 14894167-14894241 Caenorhabditis elegans
Exon157393   104   IV: 14894341-14894444 Caenorhabditis elegans
Exon157404   316   IV: 14894534-14894849 Caenorhabditis elegans
Exon157416   111   IV: 14894906-14895016 Caenorhabditis elegans
Exon157430   67   IV: 14896060-14896126 Caenorhabditis elegans
Exon157445   185   IV: 14897321-14897505 Caenorhabditis elegans
Exon157457   82   IV: 14897620-14897701 Caenorhabditis elegans
Exon157470   157   IV: 14898130-14898286 Caenorhabditis elegans
Exon157483   136   IV: 14898645-14898780 Caenorhabditis elegans
Exon157504   120   IV: 14900274-14900393 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y57G11C.24j.1 14885688 14900393 1

1 Sequence

Length
2664

1 Sequence Ontology Term

Identifier Name Description
transcript