WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.24a.1 Sequence Name  Y57G11C.24a.1
Length (nt)  2848   Chromosome Location  IV: 14885688-14900652
Chromosome . Primary Identifier  IV Chromosome Location . Start  14885688
Chromosome Location . End  14900652 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.24a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.24a Y57G11C.24a 2589   IV: 14885688-14885703

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24a.1 14885688 14900652 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon157285   16   IV: 14885688-14885703 Caenorhabditis elegans
Exon157290   221   IV: 14886614-14886834 Caenorhabditis elegans
Exon157306   228   IV: 14888379-14888606 Caenorhabditis elegans
Exon157318   124   IV: 14889210-14889333 Caenorhabditis elegans
Exon157343   311   IV: 14891464-14891774 Caenorhabditis elegans
Exon157354   233   IV: 14891833-14892065 Caenorhabditis elegans
Exon157370   178   IV: 14893787-14893964 Caenorhabditis elegans
Exon157387   104   IV: 14894341-14894444 Caenorhabditis elegans
Exon157398   316   IV: 14894534-14894849 Caenorhabditis elegans
Exon157410   111   IV: 14894906-14895016 Caenorhabditis elegans
Exon157425   67   IV: 14896060-14896126 Caenorhabditis elegans
Exon157440   185   IV: 14897321-14897505 Caenorhabditis elegans
Exon157452   82   IV: 14897620-14897701 Caenorhabditis elegans
Exon157465   157   IV: 14898130-14898286 Caenorhabditis elegans
Exon157478   136   IV: 14898645-14898780 Caenorhabditis elegans
Exon157511   379   IV: 14900274-14900652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24a.1 14885688 14900652 1

1 Sequence

Length
2848

1 Sequence Ontology Term

Identifier Name Description
transcript