WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.24e.1 Sequence Name  Y57G11C.24e.1
Length (nt)  2260   Chromosome Location  IV: 14891464-14900653
Chromosome . Primary Identifier  IV Chromosome Location . Start  14891464
Chromosome Location . End  14900653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.24e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.24e Y57G11C.24e 1998   IV: 14891466-14891774

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24e.1 14891464 14900653 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon157297   311   IV: 14891464-14891774 Caenorhabditis elegans
Exon157301   233   IV: 14891833-14892065 Caenorhabditis elegans
Exon157317   178   IV: 14893787-14893964 Caenorhabditis elegans
Exon157334   104   IV: 14894341-14894444 Caenorhabditis elegans
Exon157345   316   IV: 14894534-14894849 Caenorhabditis elegans
Exon157357   111   IV: 14894906-14895016 Caenorhabditis elegans
Exon157372   67   IV: 14896060-14896126 Caenorhabditis elegans
Exon157387   185   IV: 14897321-14897505 Caenorhabditis elegans
Exon157399   82   IV: 14897620-14897701 Caenorhabditis elegans
Exon157412   157   IV: 14898130-14898286 Caenorhabditis elegans
Exon157425   136   IV: 14898645-14898780 Caenorhabditis elegans
Exon157457   380   IV: 14900274-14900653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24e.1 14891464 14900653 1

1 Sequence

Length
2260

1 Sequence Ontology Term

Identifier Name Description
transcript