WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.24m.1 Sequence Name  Y57G11C.24m.1
Length (nt)  540   Chromosome Location  IV: 14897461-14900393
Chromosome . Primary Identifier  IV Chromosome Location . Start  14897461
Chromosome Location . End  14900393 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.24m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.24m Y57G11C.24m 540   IV: 14897461-14897505

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24m.1 14897461 14900393 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon157395   45   IV: 14897461-14897505 Caenorhabditis elegans
Exon157405   82   IV: 14897620-14897701 Caenorhabditis elegans
Exon157418   157   IV: 14898130-14898286 Caenorhabditis elegans
Exon157431   136   IV: 14898645-14898780 Caenorhabditis elegans
Exon157452   120   IV: 14900274-14900393 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.24m.1 14897461 14900393 1

1 Sequence

Length
540

1 Sequence Ontology Term

Identifier Name Description
transcript