WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57G11C.28.1 Sequence Name  Y57G11C.28.1
Length (nt)  858   Chromosome Location  IV: 14929721-14931931
Chromosome . Primary Identifier  IV Chromosome Location . Start  14929721
Chromosome Location . End  14931931 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57G11C.28.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014924 Y57G11C.28 Y57G11C.28 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57G11C.28 Y57G11C.28 858   IV: 14929721-14929794

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.28.1 14929721 14931931 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon157622   74   IV: 14929721-14929794 Caenorhabditis elegans
Exon157623   152   IV: 14929840-14929991 Caenorhabditis elegans
Exon157625   245   IV: 14930261-14930505 Caenorhabditis elegans
Exon157628   126   IV: 14930659-14930784 Caenorhabditis elegans
Exon157634   216   IV: 14931625-14931840 Caenorhabditis elegans
Exon157635   45   IV: 14931887-14931931 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57G11C.28.1 14929721 14931931 1

1 Sequence

Length
858

1 Sequence Ontology Term

Identifier Name Description
transcript