WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41E3.4a.1 Sequence Name  Y41E3.4a.1
Length (nt)  2495   Chromosome Location  IV: 15008503-15013183
Chromosome . Primary Identifier  IV Chromosome Location . Start  15008503
Chromosome Location . End  15013183 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41E3.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001336 qars-1 Y41E3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41E3.4a Y41E3.4a 2361   IV: 15008630-15008744

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.4a.1 15008503 15013183 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon158010   242   IV: 15008503-15008744 Caenorhabditis elegans
Exon158015   528   IV: 15008804-15009331 Caenorhabditis elegans
Exon158019   647   IV: 15010374-15011020 Caenorhabditis elegans
Exon158022   486   IV: 15011713-15012198 Caenorhabditis elegans
Exon158026   336   IV: 15012521-15012856 Caenorhabditis elegans
Exon158027   256   IV: 15012928-15013183 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.4a.1 15008503 15013183 -1

1 Sequence

Length
2495

1 Sequence Ontology Term

Identifier Name Description
transcript