WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41E3.7c.1 Sequence Name  Y41E3.7c.1
Length (nt)  1017   Chromosome Location  IV: 15019949-15025181
Chromosome . Primary Identifier  IV Chromosome Location . Start  15019949
Chromosome Location . End  15025181 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41E3.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012765 Y41E3.7 Y41E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41E3.7c Y41E3.7c 1017   IV: 15019949-15020022

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.7c.1 15019949 15025181 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon158043   74   IV: 15019949-15020022 Caenorhabditis elegans
Exon158047   102   IV: 15022066-15022167 Caenorhabditis elegans
Exon158052   272   IV: 15022221-15022492 Caenorhabditis elegans
Exon158060   122   IV: 15024129-15024250 Caenorhabditis elegans
Exon158066   260   IV: 15024376-15024635 Caenorhabditis elegans
Exon158071   187   IV: 15024995-15025181 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.7c.1 15019949 15025181 1

1 Sequence

Length
1017

1 Sequence Ontology Term

Identifier Name Description
transcript