WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41E3.9c.1 Sequence Name  Y41E3.9c.1
Length (nt)  1488   Chromosome Location  IV: 15032494-15036941
Chromosome . Primary Identifier  IV Chromosome Location . Start  15032494
Chromosome Location . End  15036941 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41E3.9c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012767 fcd-2 Y41E3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41E3.9c Y41E3.9c 1488   IV: 15032494-15032843

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.9c.1 15032494 15036941 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon158147   350   IV: 15032494-15032843 Caenorhabditis elegans
Exon158150   266   IV: 15034083-15034348 Caenorhabditis elegans
Exon158153   671   IV: 15035011-15035681 Caenorhabditis elegans
Exon158155   201   IV: 15036741-15036941 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.9c.1 15032494 15036941 1

1 Sequence

Length
1488

1 Sequence Ontology Term

Identifier Name Description
transcript