WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:Y41E3.11e Sequence Name  Y41E3.11e
Length (nt)  5049   Chromosome Location  IV: 15039619-15048936
Chromosome . Primary Identifier  IV Chromosome Location . Start  15039619
Chromosome Location . End  15048936 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41E3.11e

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012769 hrpu-1 Y41E3.11 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y41E3.11e 15039619 15048936 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon158165   43   IV: 15039619-15039661 Caenorhabditis elegans
Exon158169   86   IV: 15040073-15040158 Caenorhabditis elegans
Exon158172   111   IV: 15040213-15040323 Caenorhabditis elegans
Exon158175   1114   IV: 15040374-15041487 Caenorhabditis elegans
Exon158178   386   IV: 15041540-15041925 Caenorhabditis elegans
Exon158181   165   IV: 15042436-15042600 Caenorhabditis elegans
Exon158184   985   IV: 15042659-15043643 Caenorhabditis elegans
Exon158189   562   IV: 15044165-15044726 Caenorhabditis elegans
Exon158195   1123   IV: 15045292-15046414 Caenorhabditis elegans
Exon158200   297   IV: 15047323-15047619 Caenorhabditis elegans
Exon158205   177   IV: 15048760-15048936 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y41E3.11e 15039619 15048936 1

1 Sequence

Length
5049

1 Sequence Ontology Term

Identifier Name Description
transcript