WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41E3.19.1 Sequence Name  Y41E3.19.1
Length (nt)  1109   Chromosome Location  IV: 15056131-15057919
Chromosome . Primary Identifier  IV Chromosome Location . Start  15056131
Chromosome Location . End  15057919 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41E3.19.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044979 Y41E3.19 Y41E3.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41E3.19 Y41E3.19 996   IV: 15056201-15056296

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.19.1 15056131 15057919 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon158177   166   IV: 15056131-15056296 Caenorhabditis elegans
Exon158178   161   IV: 15056466-15056626 Caenorhabditis elegans
Exon158180   83   IV: 15056756-15056838 Caenorhabditis elegans
Exon158181   82   IV: 15056891-15056972 Caenorhabditis elegans
Exon158183   153   IV: 15057050-15057202 Caenorhabditis elegans
Exon158184   141   IV: 15057253-15057393 Caenorhabditis elegans
Exon158185   207   IV: 15057447-15057653 Caenorhabditis elegans
Exon158186   116   IV: 15057804-15057919 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.19.1 15056131 15057919 1

1 Sequence

Length
1109

1 Sequence Ontology Term

Identifier Name Description
transcript