WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41E3.18.1 Sequence Name  Y41E3.18.1
Length (nt)  1543   Chromosome Location  IV: 15061869-15065753
Chromosome . Primary Identifier  IV Chromosome Location . Start  15061869
Chromosome Location . End  15065753 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41E3.18.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044003 Y41E3.18 Y41E3.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41E3.18 Y41E3.18 1446   IV: 15061929-15061947

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.18.1 15061869 15065753 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon158248   79   IV: 15061869-15061947 Caenorhabditis elegans
Exon158250   89   IV: 15062073-15062161 Caenorhabditis elegans
Exon158252   102   IV: 15062546-15062647 Caenorhabditis elegans
Exon158253   234   IV: 15062693-15062926 Caenorhabditis elegans
Exon158258   237   IV: 15063113-15063349 Caenorhabditis elegans
Exon158264   243   IV: 15063815-15064057 Caenorhabditis elegans
Exon158267   151   IV: 15064519-15064669 Caenorhabditis elegans
Exon158269   106   IV: 15064848-15064953 Caenorhabditis elegans
Exon158271   186   IV: 15065312-15065497 Caenorhabditis elegans
Exon158273   116   IV: 15065638-15065753 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.18.1 15061869 15065753 -1

1 Sequence

Length
1543

1 Sequence Ontology Term

Identifier Name Description
transcript