WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41E3.15.1 Sequence Name  Y41E3.15.1
Length (nt)  978   Chromosome Location  IV: 15065866-15068918
Chromosome . Primary Identifier  IV Chromosome Location . Start  15065866
Chromosome Location . End  15068918 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41E3.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012773 srt-48 Y41E3.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41E3.15 Y41E3.15 978   IV: 15065866-15065925

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.15.1 15065866 15068918 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon158219   60   IV: 15065866-15065925 Caenorhabditis elegans
Exon158220   104   IV: 15065980-15066083 Caenorhabditis elegans
Exon158224   103   IV: 15066450-15066552 Caenorhabditis elegans
Exon158225   371   IV: 15066628-15066998 Caenorhabditis elegans
Exon158229   96   IV: 15067357-15067452 Caenorhabditis elegans
Exon158237   244   IV: 15068675-15068918 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.15.1 15065866 15068918 -1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
transcript