WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M199.4.1 Sequence Name  M199.4.1
Length (nt)  764   Chromosome Location  IV: 15124931-15126121
Chromosome . Primary Identifier  IV Chromosome Location . Start  15124931
Chromosome Location . End  15126121 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M199.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010953 clec-190 M199.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M199.4 M199.4 702   IV: 15124980-15125052

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M199.4.1 15124931 15126121 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon158487   122   IV: 15124931-15125052 Caenorhabditis elegans
Exon158488   54   IV: 15125100-15125153 Caenorhabditis elegans
Exon158489   77   IV: 15125195-15125271 Caenorhabditis elegans
Exon158491   116   IV: 15125334-15125449 Caenorhabditis elegans
Exon158492   201   IV: 15125615-15125815 Caenorhabditis elegans
Exon158494   96   IV: 15125885-15125980 Caenorhabditis elegans
Exon158495   98   IV: 15126024-15126121 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M199.4.1 15124931 15126121 -1

1 Sequence

Length
764

1 Sequence Ontology Term

Identifier Name Description
transcript