WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40H7A.8.1 Sequence Name  Y40H7A.8.1
Length (nt)  885   Chromosome Location  IV: 15139098-15140932
Chromosome . Primary Identifier  IV Chromosome Location . Start  15139098
Chromosome Location . End  15140932 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40H7A.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005208 srg-51 Y40H7A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40H7A.8 Y40H7A.8 882   IV: 15139101-15139232

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y40H7A.8.1 15139098 15140932 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon158545   135   IV: 15139098-15139232 Caenorhabditis elegans
Exon158550   267   IV: 15139505-15139771 Caenorhabditis elegans
Exon158554   483   IV: 15140450-15140932 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y40H7A.8.1 15139098 15140932 -1

1 Sequence

Length
885

1 Sequence Ontology Term

Identifier Name Description
transcript