WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y40H7A.10.1 Sequence Name  Y40H7A.10.1
Length (nt)  1093   Chromosome Location  IV: 15210123-15215597
Chromosome . Primary Identifier  IV Chromosome Location . Start  15210123
Chromosome Location . End  15215597 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40H7A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012747 Y40H7A.10 Y40H7A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y40H7A.10 Y40H7A.10 1032   IV: 15210172-15210336

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y40H7A.10.1 15210123 15215597 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon158854   214   IV: 15210123-15210336 Caenorhabditis elegans
Exon158862   300   IV: 15210985-15211284 Caenorhabditis elegans
Exon158873   316   IV: 15212439-15212754 Caenorhabditis elegans
Exon158882   194   IV: 15214948-15215141 Caenorhabditis elegans
Exon158884   69   IV: 15215529-15215597 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y40H7A.10.1 15210123 15215597 -1

1 Sequence

Length
1093

1 Sequence Ontology Term

Identifier Name Description
transcript