WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73F8A.3.1 Sequence Name  Y73F8A.3.1
Length (nt)  1023   Chromosome Location  IV: 15250152-15252257
Chromosome . Primary Identifier  IV Chromosome Location . Start  15250152
Chromosome Location . End  15252257 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73F8A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005625 srj-42 Y73F8A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73F8A.3 Y73F8A.3 1023   IV: 15250152-15250347

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.3.1 15250152 15252257 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon159099   196   IV: 15250152-15250347 Caenorhabditis elegans
Exon159100   164   IV: 15250600-15250763 Caenorhabditis elegans
Exon159102   102   IV: 15250845-15250946 Caenorhabditis elegans
Exon159103   372   IV: 15250996-15251367 Caenorhabditis elegans
Exon159109   189   IV: 15252069-15252257 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.3.1 15250152 15252257 -1

1 Sequence

Length
1023

1 Sequence Ontology Term

Identifier Name Description
transcript