WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73F8A.5.1 Sequence Name  Y73F8A.5.1
Length (nt)  3501   Chromosome Location  IV: 15259868-15269060
Chromosome . Primary Identifier  IV Chromosome Location . Start  15259868
Chromosome Location . End  15269060 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73F8A.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013518 Y73F8A.5 Y73F8A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73F8A.5 Y73F8A.5 3060   IV: 15260056-15260063

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.5.1 15259868 15269060 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon159152   196   IV: 15259868-15260063 Caenorhabditis elegans
Exon159164   194   IV: 15261857-15262050 Caenorhabditis elegans
Exon159165   205   IV: 15262110-15262314 Caenorhabditis elegans
Exon159169   114   IV: 15262437-15262550 Caenorhabditis elegans
Exon159173   671   IV: 15262817-15263487 Caenorhabditis elegans
Exon159182   108   IV: 15264667-15264774 Caenorhabditis elegans
Exon159183   772   IV: 15264836-15265607 Caenorhabditis elegans
Exon159186   317   IV: 15265776-15266092 Caenorhabditis elegans
Exon159195   301   IV: 15267503-15267803 Caenorhabditis elegans
Exon159198   247   IV: 15268023-15268269 Caenorhabditis elegans
Exon159201   376   IV: 15268685-15269060 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.5.1 15259868 15269060 1

1 Sequence

Length
3501

1 Sequence Ontology Term

Identifier Name Description
transcript