WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73F8A.11.1 Sequence Name  Y73F8A.11.1
Length (nt)  1224   Chromosome Location  IV: 15302451-15309408
Chromosome . Primary Identifier  IV Chromosome Location . Start  15302451
Chromosome Location . End  15309408 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73F8A.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013520 best-21 Y73F8A.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73F8A.11 Y73F8A.11 1188   IV: 15302462-15302529

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.11.1 15302451 15309408 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon159322   79   IV: 15302451-15302529 Caenorhabditis elegans
Exon159339   111   IV: 15305164-15305274 Caenorhabditis elegans
Exon159345   135   IV: 15305687-15305821 Caenorhabditis elegans
Exon159353   325   IV: 15306475-15306799 Caenorhabditis elegans
Exon159357   78   IV: 15308022-15308099 Caenorhabditis elegans
Exon159361   144   IV: 15308534-15308677 Caenorhabditis elegans
Exon159365   176   IV: 15308933-15309108 Caenorhabditis elegans
Exon159366   176   IV: 15309233-15309408 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.11.1 15302451 15309408 1

1 Sequence

Length
1224

1 Sequence Ontology Term

Identifier Name Description
transcript