WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73F8A.20.1 Sequence Name  Y73F8A.20.1
Length (nt)  1710   Chromosome Location  IV: 15378460-15381698
Chromosome . Primary Identifier  IV Chromosome Location . Start  15378460
Chromosome Location . End  15381698 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73F8A.20.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013526 Y73F8A.20 Y73F8A.20 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73F8A.20 Y73F8A.20 1626   IV: 15378503-15378527

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.20.1 15378460 15381698 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon159687   68   IV: 15378460-15378527 Caenorhabditis elegans
Exon159688   127   IV: 15378581-15378707 Caenorhabditis elegans
Exon159689   64   IV: 15378755-15378818 Caenorhabditis elegans
Exon159691   115   IV: 15378878-15378992 Caenorhabditis elegans
Exon159692   287   IV: 15379290-15379576 Caenorhabditis elegans
Exon159693   111   IV: 15379625-15379735 Caenorhabditis elegans
Exon159695   369   IV: 15379980-15380348 Caenorhabditis elegans
Exon159699   191   IV: 15381040-15381230 Caenorhabditis elegans
Exon159700   378   IV: 15381321-15381698 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.20.1 15378460 15381698 1

1 Sequence

Length
1710

1 Sequence Ontology Term

Identifier Name Description
transcript