WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y73F8A.21c Sequence Name  Y73F8A.21c
Length (nt)  2067   Chromosome Location  IV: 15400333-15400402
Chromosome . Primary Identifier  IV Chromosome Location . Start  15400333
Chromosome Location . End  15400402
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73F8A.21c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49996 NHR-5, isoform c 76.8 688 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00058388

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y73F8A.21c 15400333 15400402 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003604 nhr-5 Y73F8A.21 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y73F8A.21c 15400333 15400402 1
CDS:Y73F8A.21c 15400451 15400512 1
CDS:Y73F8A.21c 15400970 15401108 1
CDS:Y73F8A.21c 15401332 15401394 1
CDS:Y73F8A.21c 15401828 15402000 1
CDS:Y73F8A.21c 15402065 15402310 1
CDS:Y73F8A.21c 15403163 15403311 1
CDS:Y73F8A.21c 15404061 15404334 1
CDS:Y73F8A.21c 15404818 15405039 1
CDS:Y73F8A.21c 15405324 15405434 1
CDS:Y73F8A.21c 15406393 15406440 1
CDS:Y73F8A.21c 15406483 15406630 1
CDS:Y73F8A.21c 15406799 15407160 1

1 Sequence

Length
2067

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y73F8A.21c.1 Y73F8A.21c.1 2379   IV: 15400277-15407416