WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73F8A.34a.1 Sequence Name  Y73F8A.34a.1
Length (nt)  1583   Chromosome Location  IV: 15524092-15528528
Chromosome . Primary Identifier  IV Chromosome Location . Start  15524092
Chromosome Location . End  15528528 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73F8A.34a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013538 ari-1.4 Y73F8A.34 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73F8A.34a Y73F8A.34a 1458   IV: 15524217-15524315

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.34a.1 15524092 15528528 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon160290   224   IV: 15524092-15524315 Caenorhabditis elegans
Exon160295   273   IV: 15524388-15524660 Caenorhabditis elegans
Exon160300   121   IV: 15524716-15524836 Caenorhabditis elegans
Exon160304   428   IV: 15525681-15526108 Caenorhabditis elegans
Exon160307   420   IV: 15527273-15527692 Caenorhabditis elegans
Exon160308   69   IV: 15528368-15528436 Caenorhabditis elegans
Exon160309   48   IV: 15528481-15528528 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.34a.1 15524092 15528528 -1

1 Sequence

Length
1583

1 Sequence Ontology Term

Identifier Name Description
transcript