WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y105C5A.8a Sequence Name  Y105C5A.8a
Length (nt)  729   Chromosome Location  IV: 15612888-15612930
Chromosome . Primary Identifier  IV Chromosome Location . Start  15612888
Chromosome Location . End  15612930
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5A.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39803 Y105C5A.8, isoform a 26.9 242 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00055185
WBRNAi00019836
WBRNAi00036466

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y105C5A.8a 15612888 15612930 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013633 Y105C5A.8 Y105C5A.8 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y105C5A.8a 15612888 15612930 -1
CDS:Y105C5A.8a 15613258 15613469 -1
CDS:Y105C5A.8a 15614952 15615084 -1
CDS:Y105C5A.8a 15615369 15615469 -1
CDS:Y105C5A.8a 15616055 15616207 -1
CDS:Y105C5A.8a 15616985 15617071 -1

1 Sequence

Length
729

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y105C5A.8a.1 Y105C5A.8a.1 1012   IV: 15612605-15617071